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Partial Least Squares: A Comprehensive Guide to Overcoming Data Challenges

Multicollinearity and Multivariate Analysis with PLS

Diogo Ribeiro
21 min readFeb 29, 2024

Keywords: Partial Least Squares (PLS), Multicollinearity, Multivariate Analysis, Predictive Modeling, PLS Regression, PLS Discriminant Analysis, High-dimensional Data, Variance vs. Covariance, Machine Learning, Data Science, Statistical Analysis, R Programming, Python Programming, Dimensionality Reduction, Canonical Correlation Analysis, Principal Components Regression, Model Benchmarking, Chemometrics, Sensory Analysis.

Introduction to Partial Least Squares

Overview of Linear Regression and Its Limitations

Linear regression stands as one of the most fundamental and widely used statistical methods for understanding the relationship between a dependent variable and one or more independent variables. By fitting a linear equation to observed data, linear regression models can predict the outcome of a dependent variable based on the values of independent variables. However, despite its ubiquity, linear regression comes with its own set of limitations, particularly when dealing with multicollinearity among predictors and high-dimensional data.

Multicollinearity occurs when two or more independent variables in a regression model are highly correlated, making it difficult to ascertain the individual effect of each variable on the dependent variable. This not only inflates the standard errors of the coefficient estimates but can also lead to less reliable statistical inferences. Additionally, traditional linear regression struggles with datasets where the number of independent variables is large relative to the number of observations, often resulting in overfitting where the model captures noise rather than the underlying signal.

Introduction to Partial Least Squares (PLS)

To address these challenges, Partial Least Squares (PLS) emerges as a robust statistical method that combines features of principal component analysis (PCA) and multiple regression. PLS is particularly adept at handling scenarios characterized by multicollinearity and high-dimensional datasets. Unlike traditional…

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